Course: Bioenergetics

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Course title Bioenergetics
Course code KEBR/631
Organizational form of instruction Lecture + Lesson
Level of course Doctoral
Year of study not specified
Frequency of the course In each academic year, in the winter semester.
Semester Winter
Number of ECTS credits 4
Language of instruction English
Status of course Compulsory-optional
Form of instruction Face-to-face
Work placements This is not an internship
Recommended optional programme components None
Course availability The course is available to visiting students
Lecturer(s)
  • Prášil Ondřej, prof. RNDr. Ph.D.
Course content
Students are provided with presentations from lectures and pdfs of textbooks on Moodle.

Learning activities and teaching methods
Monologic (reading, lecture, briefing)
  • Class attendance - 55 hours per semester
  • Preparation for exam - 45 hours per semester
Learning outcomes
Current research in bioenergetics. Transformation of energy in living organisms: overview, thermodynamic description. Overview of high energy compounds. Examples of mechanisms of energy conservation on the level of substrate. Biomembranes: lipids, proteins and their interactions. Mechanisms of membrane transport. Transporters, ion chanels, ionophores. Membrane transpoert ATPases. Enzymes, prosthetic groups and electron transporters in bioenergetically important redox reactions. Membrane bound electron transport chains. Methods how to study the electron transport chains. Artificial donors and acceptors. Coupling of redox reactions with the generation of proton gradient. Mitochondrial respiration and oxidative phosphorylation. Aerobic respiration in chemoorganotrophic and chemolithotrophic bacteria. Anaerobic respiration. Regulative mechanisms in facultativ anaerobs. Bacteriorhodopsin photosynthesis. Anoxygenic and oxygenic photosynthesis dependent on (bacterio) chlorophyll, cooperation of photosystems in oxygenic photosynthesis. Carbon fixation. Mutual metabolic cooperation of mitochondria, chloroplasts and cytoplasm. Mechanochemical energy transformation. Thermogenesisi in brown fat tissuei. Bioluminiscence. Bioenergetics of natrium ion. Evolution of bioenergetic processes. Bioenergetics and cycles of biogenic compounds in nature.
The graduate has detailed knowledge of bioenergetic processes. He / she is able to quantitatively describe and solve basic bioenergy processes.
Prerequisites
Basic knowledge of Biochemistry and Physical Chemistry (thermodynamics), elementary Mathematics

Assessment methods and criteria
Combined exam

Before the exam, the student must elaborate the examples discussed in the exercises.
Recommended literature
  • D.G.Nicholls, S.J.Ferguson: Bioenergetics 3, Academic Press, 2001, ISBN 0-12-518121-3.
  • R.E.Blankenship: Molecular Mechanisms of Photosynthesis, Blackwell, 2002, ISBN 0-632-04321-0.


Study plans that include the course
Faculty Study plan (Version) Category of Branch/Specialization Recommended year of study Recommended semester
Faculty: Faculty of Science Study plan (Version): Biophysics (1) Category: Physics courses - Recommended year of study:-, Recommended semester: Winter
Faculty: Faculty of Science Study plan (Version): Biophysics (1) Category: Physics courses - Recommended year of study:-, Recommended semester: Winter
Faculty: Faculty of Science Study plan (Version): Biophysics (1) Category: Physics courses - Recommended year of study:-, Recommended semester: Winter
Faculty: Faculty of Science Study plan (Version): Biophysics (1) Category: Physics courses - Recommended year of study:-, Recommended semester: Winter