Course: Ecological stoichiometry and energy fluxes

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Course title Ecological stoichiometry and energy fluxes
Course code KBE/030
Organizational form of instruction Lecture + Lesson
Level of course Master
Year of study not specified
Frequency of the course In each academic year, in the winter semester.
Semester Winter
Number of ECTS credits 6
Language of instruction Czech
Status of course Compulsory
Form of instruction Face-to-face
Work placements This is not an internship
Recommended optional programme components None
Lecturer(s)
  • Vrba Jaroslav, prof. RNDr. CSc.
  • Čapek Petr, RNDr. Ph.D.
Course content
The introductory lectures aim to explain fundamentals of ecological stoichiometry, principles of evolution of life and functioning of the biological systems. The principles are then applied as explanatory mechanisms of various ecological processes occurring in terrestrial and aquatic ecosystems at different levels of biological organization. The last lectures focus on quantitative aspects of ecological stoichiometry and metabolic theory, their history, and the potential of their use in mathematical modelling of biological processes. Content of tutorials/seminar: During tutorials, students explore quantitative outcomes of concepts described in lectures. The aim of tutorials is to fully comprehend consequences of stoichiometric imbalances between environment, resources and organisms, or effects of body mass and organism growth rate changes on various processes occurring in terrestrial and aquatic ecosystems. Introductory tutorials are focused on recapitulation of mathematical operations and functions, basics of simple statistical methods including distributions and error propagation. Students also thoroughly practice unit conversions. The remaining tutorials are divided into two broad topics focused on principles of ecological stoichiometry and metabolic theory in detail. The former cover: (i) relationship between availability and stoichiometry of macronutrients in the environment and the growth rate of organisms, (ii) growth rate-body element stoichiometry relationship, (iii) quantification of organic nutrients mineralization rate at different initial conditions, and (iv) quantification of organism's adaptability to changing environmental conditions. Within the second topic, students explore: (i) body mass-metabolic rate relationship, (ii) temperature-metabolic rate relationship, (iii) energy dissipation through the food chain, and (iv) changes in energy balance of organism along the gradients of energy availability in environment and the energy demands of organism for maintenance and survival. During the tutorials, students should solve two exercises specific to topics explored.

Learning activities and teaching methods
  • Preparation for credit - 30 hours per semester
  • Class attendance - 52 hours per semester
  • Preparation for classes - 40 hours per semester
  • Preparation for exam - 30 hours per semester
Learning outcomes
The objective of this course is to provide introduction into two dynamically evolving theoretical concepts of general ecology - ecological stoichiometry and metabolic theory. While the former focuses on relative abundance of elements during the evolution of life and link them to the fluxes of matter through biological systems, the latter describes the fluxes of energy. Together, they represent a robust theoretical background for understanding both qualitative and quantitative functioning of the biological systems.

Prerequisites
Fundamental knowledge of ecology and/or limnology, and biogeochemical cycles on a level of bachelor students is required.

Assessment methods and criteria
unspecified
Students must submit the solved exercises on time and pass the credit exam testing the understanding of quantitative mechanisms explored in tutorials to attend the final exam. To pass the final exam, students need to answer at least 60% of questions correctly.
Recommended literature
  • Allen, A. P., Gillooly, J. F., & Brown, J. H. (2005). Linking the global carbon cycle to individual metabolism. Functional Ecology, 19 (2), 202-213. https://doi.org/10.1111/j.1365-2435.2005.00952.x.
  • Allen AP, Gillooly JF, 2009: Towards an integration of ecological stoichiometry and the metabolic theory of ecology to better understand nutrient cycling. Ecol. Lett. 12, 369-384..
  • Brown, J. H., Gillooly, J. F., Allen, A. P., Savage, V. M., & West, G. B. (2004). Toward a metabolic theory of ecology. Ecology, 85(7), 1771-1789. https://doi.org/10.1890/03-9000.
  • Cleveland CC, Liptzin D, 2007: C:N:P stoichiometry in soil: is there a "Redfield ratio" for the microbial biomass? Biogeochemistry 85:235-252..
  • DeLong, J. P., Okie, J. G., Moses, M. E., Sibly, R. M., & Brown, J. H. (2010). Shifts in metabolic scaling, production, and efficiency across major evolutionary transitions of life. Proceedings of the National Academy of Sciences of the United States of America, 107 (29), 12941-12945. https://doi.org/10.1073/pnas.1007783107.
  • Elser, J. (2006). Biological stoichiometry: a chemical bridge between ecosystem ecology and evolutionary biology. The American Naturalist, 168 Suppl(6), S25-35. https://doi.org/10.1086/509048.
  • Enriquez, S., Duarte, C. M., & Sandjensen, K. (1993). Patterns in decomposition rates among photosynthetic organisms - the importance of detritus C-N-P content. Oecologia, 94 (4), 457-471..
  • Cherif, M., & Loreau, M. (2009). When microbes and consumers determine the limiting nutrient of autotrophs: a theoretical analysis. Proceedings. Biological Sciences The Royal Society, 276(1656), 487-497. https://doi.org/10.1098/rspb.2008.0560.
  • Schramski, J. R., Dell, A. I., Grady, J. M., Sibly, R. M., & Brown, J. H. (2015). Metabolic theory predicts whole-ecosystem properties. Proceedings of the National Academy of Sciences, 112(8), 2617-2622. https://doi.org/10.1073/pnas.1423502112.
  • Sterner RW, Elser JJ, 2002: Ecological stoichiometry: the biology of elements from molecules to the biosphere. Princeton University Press, Princeton, 439 pp.


Study plans that include the course
Faculty Study plan (Version) Category of Branch/Specialization Recommended year of study Recommended semester